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Homo sapiens
20 Downloadable Samples
Affymetrix HT Human Genome U133A Array (hthgu133a)
Description
Systematic somatic mutation screening in human clear cell renal cell carcinoma reveals inactivation of chromatin modification genes
Publication Title
Systematic somatic mutation screening in human clear cell renal cell carcinoma reveals inactivation of chromatin modification genes
Sample Metadata Fields
Disease, Disease stage, Cell line
View Samples- Homo sapiens
- 16 Downloadable Samples
- Illumina HumanHT-12 V4.0 expression beadchip
Description
Microarray gene expression data is used to compare the transcriptomics of hiPSC, hiPSC derived forward programmed-, hiPSC derived directed differentiated- megakaryoctes AND cord- blood derived megakaryocytes
Publication Title
No associated publication
Sample Metadata Fields
Specimen part, Cell line
View Samples
ERP000447- Danio rerio
- 12 Downloadable Samples
IlluminaGenomeAnalyzerII
Description
No description.
Publication Title
No associated publication
Sample Metadata Fields
No sample metadata fields
View Samples- Mus musculus
- 12 Downloadable Samples
- Illumina MouseWG-6 v2.0 expression beadchip
Description
We performed whole-genome gene expression profiling in Pik3cg-/- mice and subsequent gene ontology clustering of differentially expressed genes compared to wild type mice, in order to investigate the role of Pik3cg in platelet membrane biogenesis and blood coagulation.
Publication Title
Maps of open chromatin guide the functional follow-up of genome-wide association signals: application to hematological traits.
Sample Metadata Fields
Sex, Specimen part
View Samples- Danio rerio
- 7 Downloadable Samples
- IlluminaGenomeAnalyzerII
Description
No description.
Publication Title
No associated publication
Sample Metadata Fields
No sample metadata fields
View Samples ERP000723- Mus musculus
- 6 Downloadable Samples
- Illumina Genome Analyzer II
Description
No description.
Publication Title
No associated publication
Sample Metadata Fields
No sample metadata fields
View Samples- Schizosaccharomyces pombe
- 2 Downloadable Samples
- Affymetrix Yeast Genome 2.0 Array (yeast2)
Description
To estimate mRNA steady-state levels we used RNA extracted from logarithmically growing fisson yeast cells on Affymetrix Yeast 2.0 Genechip arrays. The signal intensities from two independent biological repeats were averaged, resulting in measurements for 4818 out of 4962 nuclear protein-coding genes.
Publication Title
A network of multiple regulatory layers shapes gene expression in fission yeast.
Sample Metadata Fields
Sex, Subject
View Samples- Schizosaccharomyces pombe
- 5 Downloadable Samples
- Affymetrix Yeast Genome 2.0 Array (yeast2), UNKNOWN
Description
Transcription profiling of fission yeast /yox1/ deletion and genome wide location analysis of Yox1p and Cdc10p transcription factors reveal a negative feedback interaction: /yox1 /is transcriptionally activated by MBF, and Yox1p in turn transcriptionally represses the MBF target genes (including /yox1 /itself).
Publication Title
The Fission Yeast Homeodomain Protein Yox1p Binds to MBF and Confines MBF-dependent Cell-Cycle Transcription to G1-S via Negative Feedback
Sample Metadata Fields
Time
View Samples- Homo sapiens
- 8 Downloadable Samples
- Affymetrix Human Gene 2.0 ST Array (hugene20st)
Description
Human leukocyte cones were obtained from anonymous blood donors and peripheral blood B cells were isolated from PMBCs following ficoll density centrifugation. Isolated B cells were cultured in normoxia or 1% O2 for 24 h and RNA was extracted using an RNeasy Mini kit (Qiagen). This study was approved by the East of England - Cambridge Central Research Ethics Committee (REC reference 08/H0308/176).
Publication Title
No associated publication
Sample Metadata Fields
Specimen part
View Samples- Mus musculus
- 22 Downloadable Samples
- Affymetrix Mouse Expression 430B Array (moe430b), Affymetrix Mouse Expression 430A Array (moe430a)
Description
Effect of high fat diet feeding on gene expression
Publication Title
Subtle metabolic and liver gene transcriptional changes underlie diet-induced fatty liver susceptibility in insulin-resistant mice.
Sample Metadata Fields
Sex, Age, Specimen part, Subject
View Samples