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accession-icon GSE72353
A lincRNA connected to cell mortality and epigenetically-silenced in most common human cancers
  • organism-icon Homo sapiens
  • sample-icon 16 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Gene 1.0 ST Array (hugene10st)

Description

- Gene expression changes linked to two step immortalization of human mammary epithelial cells (HMEC).

Publication Title

A lincRNA connected to cell mortality and epigenetically-silenced in most common human cancers.

Sample Metadata Fields

Specimen part

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accession-icon GSE47047
Gene expression data from immortal and arsenite-transformed malignant prostate epithelial cells
  • organism-icon Homo sapiens
  • sample-icon 6 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Gene 1.0 ST Array (hugene10st)

Description

The aim of this study was to determine how gene expression is changed after arsenite-induced malignant transformation of prostate epithelial cells.

Publication Title

Coordinate H3K9 and DNA methylation silencing of ZNFs in toxicant-induced malignant transformation.

Sample Metadata Fields

Specimen part, Cell line, Treatment

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refine.bio is a repository of uniformly processed and normalized, ready-to-use transcriptome data from publicly available sources. refine.bio is a project of the Childhood Cancer Data Lab (CCDL)

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Developed by the Childhood Cancer Data Lab

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Cite refine.bio

Casey S. Greene, Dongbo Hu, Richard W. W. Jones, Stephanie Liu, David S. Mejia, Rob Patro, Stephen R. Piccolo, Ariel Rodriguez Romero, Hirak Sarkar, Candace L. Savonen, Jaclyn N. Taroni, William E. Vauclain, Deepashree Venkatesh Prasad, Kurt G. Wheeler. refine.bio: a resource of uniformly processed publicly available gene expression datasets.
URL: https://www.refine.bio

Note that the contributor list is in alphabetical order as we prepare a manuscript for submission.

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