Identifying DEK-dependent transcriptional signatures in HPV+ and HPV- head and neck squamous cell carcinoma (HNSCC)

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SRP060234

Homo sapiens

4 Downloadable Samples

Illumina HiSeq 2500

Submitter Supplied Information

Description

We report the first RNA-Seq experiments profiling the effects of DEK loss in HNSCC. Our data also incorporates HPV+ and HPV- tumors to idenfity HPV-dependent and -independent gene signatures. Overall design: RNA-Seq of DEK-dependent gene signatures in HNSCC cell lines

PubMed ID

26527316

Publication Title

IRAK1 is a novel DEK transcriptional target and is essential for head and neck cancer cell survival.

Total Samples

Submitter’s Institution

No associated institution

Authors

Adams AK, Bolanos LC, Dexheimer PJ, Karns RA, Aronow BJ, Komurov K, Jegga AG, Casper KA, Patil YJ, Wilson KM, Starczynowski DT, Wells SI

Source Repository

Sequence Read Archive (SRA)

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