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GSE52067
miRNAs trigger widespread epigenetically-activated siRNAs from transposons inArabidopsis [Affymetrix]
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Arabidopsis thaliana
1 Downloadable Sample
Affymetrix Arabidopsis ATH1 Genome Array (ath1121501)
Submitter Supplied Information
Description
Utilizing Affymetrix ATH1 microarrays to analyze transposon expression in DNA methylation mutants, and RNAi mutants, compared to wildtype.
PubMed ID
24670663
Publication Title
miRNAs trigger widespread epigenetically activated siRNAs from transposons in Arabidopsis.
Total Samples
8
Submitter’s Institution
Cold Spring Harbor Laboratory
Authors
Creasey KM
,
Zhai J
,
Borges F
,
Van Ex F
,
Regulski M
,
Meyers BC
,
Martienssen RA
Source Repository
Gene Expression Omnibus (GEO)
Samples
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Specimen part
Processing Information
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GSM1258179
rdr6-15 biological replicate1
plant inflorescence
Affymetrix SCAN
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Sample not processed
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GSM1258178
ddm1-2 biological replicate2
plant inflorescence
NA
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Sample not processed
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GSM1258175
Col-0 biological replicate1
plant inflorescence
NA
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Sample not processed
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GSM1258180
rdr6-15 biological replicate2
plant inflorescence
NA
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Sample not processed
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GSM1258181
ddm1-2 rdr6-15 biological replicate1
plant inflorescence
NA
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Sample not processed
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GSM1258176
Col-0 biological replicate2
plant inflorescence
NA
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Sample not processed
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GSM1258177
ddm1-2 biological replicate1
plant inflorescence
NA
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Sample not processed
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GSM1258182
ddm1-2 rdr6-15 biological replicate2
plant inflorescence
NA
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